DREAM single cell transcriptomics challenge
These pages host a supplementary material for the DREAM Single Cell transcriptomics Challenge.
Visualizations:
- Rankings (Challenge) - Overall team rankings based on all 3 metrics
- Rankings (Post Challenge) - Overall team rankings based on all 3 metrics for the post challenge
- Jacard Similarity (Post Challenge) - Stability of feature selection (genes used) across 10 CV partitions
- Gene Frequencies - Most frequently chosen genes
- Gene Venn Diagrams - Venn diagrams of most frequently chosen genes
- Spatial Gene Expression - 3-D visualizations of in-situ spatial gene expressions (top 5 genes)
- t-SNE Clustering - 3-D visualizations of the clusters